EBOV (Ebola virus)

A collection of resources for whole genome sequencing and analysis of Ebola virus (EBOV)

Resources and documents

• Ebola virus bioinformatics protocol

link: /viruses/ebov/ebov-bioinformatics-sop.html

• Ebola virus sequencing kit-list

link: /viruses/ebov/ebov-seq-kit.html

• Ebola virus bioinformatics environment setup

link: /viruses/ebov/ebov-it-setup.html

• Ebola virus sequencing protocol

link: /viruses/ebov/ebov-seq-sop.html

link: /viruses/ebov/ebov-validation.html

• Ebola virus phylogenetic analysis protocol

link: /viruses/ebov/ebov-phylogenetics-sop.html

• Ebola virus phylogenetic analysis protocol

link: /viruses/ebov/ebov-phylogenetics-sop-ituri.html

• Ebola virus sequencing protocol

link: /viruses/ebov/ebov-seq-sop-fr.html

Setup guides

User-interface pipelines using Epi2me

Command line interface pipeline SOPs